Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 AC022517.1-201ENST00000592429 346 ntBASIC20.68■□□□□ 0.9
ZNF140P52738 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF140P52738 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF140P52738 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF140P52738 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF140P52738 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF140P52738 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF140P52738 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF140P52738 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF140P52738 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF140P52738 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF140P52738 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF140P52738 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF140P52738 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
ZNF140P52738 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF140P52738 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZNF140P52738 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZNF140P52738 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF140P52738 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZNF140P52738 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 TERF1P5-201ENST00000477545 1207 ntBASIC20.65■□□□□ 0.9
ZNF140P52738 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF140P52738 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNF140P52738 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF140P52738 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNF140P52738 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF140P52738 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF140P52738 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF140P52738 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF140P52738 AC116050.2-201ENST00000612102 1779 ntBASIC20.64■□□□□ 0.9
ZNF140P52738 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
ZNF140P52738 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZNF140P52738 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZNF140P52738 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF140P52738 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF140P52738 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF140P52738 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF140P52738 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF140P52738 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF140P52738 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
ZNF140P52738 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.63■□□□□ 0.89
ZNF140P52738 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF140P52738 AC092437.1-201ENST00000624794 1048 ntBASIC20.63■□□□□ 0.89
ZNF140P52738 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF140P52738 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF140P52738 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZNF140P52738 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms