Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC3P40938 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC3P40938 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC3P40938 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RFC3P40938 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC3P40938 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC3P40938 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.96■□□□□ 0.63
RFC3P40938 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 RARRES2P4-201ENST00000514074 484 ntBASIC18.96■□□□□ 0.63
RFC3P40938 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.96■□□□□ 0.63
RFC3P40938 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RFC3P40938 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC3P40938 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RFC3P40938 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
RFC3P40938 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RFC3P40938 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RFC3P40938 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RFC3P40938 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.95■□□□□ 0.62
RFC3P40938 AC010980.2-201ENST00000587099 1412 ntBASIC18.95■□□□□ 0.62
RFC3P40938 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.95■□□□□ 0.62
RFC3P40938 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
RFC3P40938 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.95■□□□□ 0.62
RFC3P40938 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.95■□□□□ 0.62
RFC3P40938 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.95■□□□□ 0.62
RFC3P40938 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RFC3P40938 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC3P40938 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.95■□□□□ 0.62
RFC3P40938 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFC3P40938 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC3P40938 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RFC3P40938 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC3P40938 AL512625.2-201ENST00000417533 625 ntBASIC18.94■□□□□ 0.62
RFC3P40938 AC091799.1-201ENST00000422823 811 ntBASIC18.94■□□□□ 0.62
RFC3P40938 RNA5SP413-201ENST00000516373 109 ntBASIC18.94■□□□□ 0.62
RFC3P40938 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC3P40938 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC3P40938 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC3P40938 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.93■□□□□ 0.62
RFC3P40938 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.93■□□□□ 0.62
RFC3P40938 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.93■□□□□ 0.62
RFC3P40938 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC3P40938 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC3P40938 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC3P40938 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC3P40938 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFC3P40938 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFC3P40938 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC3P40938 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFC3P40938 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 AL355472.2-201ENST00000422958 438 ntBASIC18.92■□□□□ 0.62
RFC3P40938 AC073210.2-201ENST00000430369 194 ntBASIC18.92■□□□□ 0.62
RFC3P40938 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC3P40938 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC3P40938 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC3P40938 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC3P40938 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC3P40938 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms