Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0CP27449 AC137630.3-201ENST00000607245 391 ntBASIC16.59■□□□□ 0.25
ATP6V0CP27449 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0CP27449 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0CP27449 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0CP27449 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0CP27449 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ATP6V0CP27449 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0CP27449 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0CP27449 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.58■□□□□ 0.25
ATP6V0CP27449 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
ATP6V0CP27449 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6V0CP27449 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.58■□□□□ 0.25
ATP6V0CP27449 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6V0CP27449 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0CP27449 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0CP27449 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP6V0CP27449 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0CP27449 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0CP27449 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0CP27449 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 AC068587.7-201ENST00000641602 218 ntBASIC16.57■□□□□ 0.24
ATP6V0CP27449 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ATP6V0CP27449 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0CP27449 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ATP6V0CP27449 AC010980.1-201ENST00000587192 1142 ntBASIC16.56■□□□□ 0.24
ATP6V0CP27449 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP6V0CP27449 FP700111.2-201ENST00000619190 1892 ntBASIC16.56■□□□□ 0.24
ATP6V0CP27449 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ATP6V0CP27449 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP6V0CP27449 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0CP27449 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 AP000974.1-201ENST00000623909 2387 ntBASIC16.55■□□□□ 0.24
ATP6V0CP27449 RARRES2P2-201ENST00000394842 485 ntBASIC16.55■□□□□ 0.24
ATP6V0CP27449 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.55■□□□□ 0.24
ATP6V0CP27449 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0CP27449 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP6V0CP27449 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 AL451085.2-201ENST00000605085 799 ntBASIC16.54■□□□□ 0.24
ATP6V0CP27449 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0CP27449 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0CP27449 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms