Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NCK1P16333 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.56■□□□□ 0.72
NCK1P16333 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.56■□□□□ 0.72
NCK1P16333 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.56■□□□□ 0.72
NCK1P16333 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.56■□□□□ 0.72
NCK1P16333 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.56■□□□□ 0.72
NCK1P16333 SMUG1P1-201ENST00000590640 811 ntBASIC19.56■□□□□ 0.72
NCK1P16333 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.56■□□□□ 0.72
NCK1P16333 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.56■□□□□ 0.72
NCK1P16333 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
NCK1P16333 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCK1P16333 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NCK1P16333 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.55■□□□□ 0.72
NCK1P16333 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.55■□□□□ 0.72
NCK1P16333 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
NCK1P16333 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NCK1P16333 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.55■□□□□ 0.72
NCK1P16333 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.55■□□□□ 0.72
NCK1P16333 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.55■□□□□ 0.72
NCK1P16333 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 AC136469.2-201ENST00000623944 1028 ntBASIC19.55■□□□□ 0.72
NCK1P16333 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.55■□□□□ 0.72
NCK1P16333 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 AL162377.1-201ENST00000618844 1793 ntBASIC19.55■□□□□ 0.72
NCK1P16333 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCK1P16333 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NCK1P16333 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.54■□□□□ 0.72
NCK1P16333 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
NCK1P16333 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
NCK1P16333 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.54■□□□□ 0.72
NCK1P16333 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCK1P16333 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NCK1P16333 AC099778.1-201ENST00000568593 1911 ntBASIC19.53■□□□□ 0.72
NCK1P16333 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.53■□□□□ 0.72
NCK1P16333 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.53■□□□□ 0.72
NCK1P16333 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.53■□□□□ 0.72
NCK1P16333 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCK1P16333 AC087289.5-201ENST00000586076 3175 ntBASIC19.52■□□□□ 0.72
NCK1P16333 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.52■□□□□ 0.72
NCK1P16333 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.52■□□□□ 0.72
NCK1P16333 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.52■□□□□ 0.72
NCK1P16333 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
NCK1P16333 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.52■□□□□ 0.72
NCK1P16333 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.52■□□□□ 0.72
NCK1P16333 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCK1P16333 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.52■□□□□ 0.72
NCK1P16333 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
NCK1P16333 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.52■□□□□ 0.71
NCK1P16333 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NCK1P16333 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NCK1P16333 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.52■□□□□ 0.71
NCK1P16333 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.51■□□□□ 0.71
NCK1P16333 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.51■□□□□ 0.71
NCK1P16333 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.51■□□□□ 0.71
NCK1P16333 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.51■□□□□ 0.71
NCK1P16333 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NCK1P16333 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms