Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.63■□□□□ 0.73
TPRP12270 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.63■□□□□ 0.73
TPRP12270 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 MYC-208ENST00000641036 567 ntBASIC19.63■□□□□ 0.73
TPRP12270 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.63■□□□□ 0.73
TPRP12270 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.63■□□□□ 0.73
TPRP12270 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPRP12270 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.62■□□□□ 0.73
TPRP12270 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
TPRP12270 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.62■□□□□ 0.73
TPRP12270 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.62■□□□□ 0.73
TPRP12270 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.62■□□□□ 0.73
TPRP12270 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.62■□□□□ 0.73
TPRP12270 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
TPRP12270 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TPRP12270 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.62■□□□□ 0.73
TPRP12270 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPRP12270 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.62■□□□□ 0.73
TPRP12270 LINC00543-201ENST00000567234 1845 ntBASIC19.62■□□□□ 0.73
TPRP12270 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.61■□□□□ 0.73
TPRP12270 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 DUSP8P3-201ENST00000399571 1760 ntBASIC19.61■□□□□ 0.73
TPRP12270 AC087633.2-202ENST00000565166 1439 ntBASIC19.61■□□□□ 0.73
TPRP12270 AL031133.1-201ENST00000406807 723 ntBASIC19.61■□□□□ 0.73
TPRP12270 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 AF186192.3-201ENST00000583427 947 ntBASIC19.61■□□□□ 0.73
TPRP12270 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.61■□□□□ 0.73
TPRP12270 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.61■□□□□ 0.73
TPRP12270 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 MCRIP2P1-201ENST00000394346 511 ntBASIC19.61■□□□□ 0.73
TPRP12270 AP000347.1-202ENST00000435868 847 ntBASIC19.61■□□□□ 0.73
TPRP12270 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TPRP12270 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPRP12270 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.6■□□□□ 0.73
TPRP12270 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 AC073195.1-201ENST00000607241 877 ntBASIC19.6■□□□□ 0.73
TPRP12270 AP000525.1-201ENST00000608286 694 ntBASIC19.6■□□□□ 0.73
TPRP12270 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPRP12270 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TPRP12270 AC063952.2-201ENST00000498792 1227 ntBASIC19.59■□□□□ 0.73
TPRP12270 AC022616.7-201ENST00000525383 220 ntBASIC19.59■□□□□ 0.73
TPRP12270 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.59■□□□□ 0.73
TPRP12270 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TPRP12270 LINC01238-205ENST00000567549 1107 ntBASIC19.59■□□□□ 0.73
TPRP12270 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
TPRP12270 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPRP12270 AP006587.3-201ENST00000525742 1516 ntBASIC19.59■□□□□ 0.73
TPRP12270 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPRP12270 AP004607.7-201ENST00000527152 1677 ntBASIC19.59■□□□□ 0.73
TPRP12270 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TPRP12270 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPRP12270 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.59■□□□□ 0.73
TPRP12270 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.59■□□□□ 0.73
TPRP12270 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.59■□□□□ 0.73
TPRP12270 AC006011.2-201ENST00000621313 1158 ntBASIC19.59■□□□□ 0.73
TPRP12270 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.59■□□□□ 0.73
TPRP12270 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.59■□□□□ 0.73
TPRP12270 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TPRP12270 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
TPRP12270 AC079630.1-202ENST00000618127 1840 ntBASIC19.59■□□□□ 0.73
TPRP12270 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPRP12270 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.58■□□□□ 0.73
TPRP12270 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPRP12270 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.58■□□□□ 0.73
TPRP12270 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPRP12270 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TPRP12270 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TPRP12270 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPRP12270 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPRP12270 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.58■□□□□ 0.72
TPRP12270 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TPRP12270 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.58■□□□□ 0.72
TPRP12270 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.58■□□□□ 0.72
TPRP12270 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.58■□□□□ 0.72
TPRP12270 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPRP12270 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPRP12270 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms