Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CD74P04233 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 TSPY9P-201ENST00000440215 945 ntBASIC17.42■□□□□ 0.38
CD74P04233 TSPY11P-201ENST00000442607 1045 ntBASIC17.42■□□□□ 0.38
CD74P04233 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.42■□□□□ 0.38
CD74P04233 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.42■□□□□ 0.38
CD74P04233 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.42■□□□□ 0.38
CD74P04233 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CD74P04233 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CD74P04233 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.41■□□□□ 0.38
CD74P04233 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.41■□□□□ 0.38
CD74P04233 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD74P04233 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 AP005435.1-201ENST00000529293 1178 ntBASIC17.41■□□□□ 0.38
CD74P04233 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD74P04233 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CD74P04233 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CD74P04233 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.4■□□□□ 0.38
CD74P04233 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CD74P04233 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CD74P04233 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.4■□□□□ 0.38
CD74P04233 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CD74P04233 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.4■□□□□ 0.38
CD74P04233 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.4■□□□□ 0.38
CD74P04233 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.4■□□□□ 0.38
CD74P04233 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CD74P04233 BX005040.4-201ENST00000637145 1518 ntBASIC17.4■□□□□ 0.38
CD74P04233 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CD74P04233 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 AC116562.4-201ENST00000641316 2276 ntBASIC17.4■□□□□ 0.38
CD74P04233 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.4■□□□□ 0.38
CD74P04233 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD74P04233 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD74P04233 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD74P04233 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.39■□□□□ 0.38
CD74P04233 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD74P04233 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD74P04233 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CD74P04233 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD74P04233 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CD74P04233 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD74P04233 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CD74P04233 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD74P04233 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CD74P04233 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.39■□□□□ 0.37
CD74P04233 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.39■□□□□ 0.37
CD74P04233 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD74P04233 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD74P04233 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CD74P04233 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD74P04233 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
CD74P04233 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD74P04233 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CD74P04233 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.38■□□□□ 0.37
CD74P04233 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.38■□□□□ 0.37
CD74P04233 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.38■□□□□ 0.37
CD74P04233 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.38■□□□□ 0.37
CD74P04233 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.38■□□□□ 0.37
CD74P04233 AC011484.1-201ENST00000377652 1995 ntBASIC17.38■□□□□ 0.37
CD74P04233 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CD74P04233 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CD74P04233 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD74P04233 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CD74P04233 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CD74P04233 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.37■□□□□ 0.37
CD74P04233 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.37■□□□□ 0.37
CD74P04233 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
CD74P04233 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms