Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
C4BPAP04003 AC116050.2-201ENST00000612102 1779 ntBASIC22.33■■□□□ 1.16
C4BPAP04003 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C4BPAP04003 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
C4BPAP04003 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
C4BPAP04003 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.32■■□□□ 1.16
C4BPAP04003 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C4BPAP04003 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C4BPAP04003 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.32■■□□□ 1.16
C4BPAP04003 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.32■■□□□ 1.16
C4BPAP04003 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
C4BPAP04003 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.32■■□□□ 1.16
C4BPAP04003 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
C4BPAP04003 AC068338.2-201ENST00000563278 1430 ntBASIC22.31■■□□□ 1.16
C4BPAP04003 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.31■■□□□ 1.16
C4BPAP04003 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
C4BPAP04003 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
C4BPAP04003 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
C4BPAP04003 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
C4BPAP04003 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
C4BPAP04003 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.31■■□□□ 1.16
C4BPAP04003 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.31■■□□□ 1.16
C4BPAP04003 RAP2CP1-201ENST00000605103 478 ntBASIC22.31■■□□□ 1.16
C4BPAP04003 AC231657.2-201ENST00000624556 255 ntBASIC22.31■■□□□ 1.16
C4BPAP04003 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.31■■□□□ 1.16
C4BPAP04003 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
C4BPAP04003 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.3■■□□□ 1.16
C4BPAP04003 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
C4BPAP04003 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.3■■□□□ 1.16
C4BPAP04003 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.3■■□□□ 1.16
C4BPAP04003 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 AL591742.1-201ENST00000604433 565 ntBASIC22.3■■□□□ 1.16
C4BPAP04003 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.3■■□□□ 1.16
C4BPAP04003 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
C4BPAP04003 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.3■■□□□ 1.16
C4BPAP04003 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.3■■□□□ 1.16
C4BPAP04003 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.3■■□□□ 1.16
C4BPAP04003 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C4BPAP04003 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.3■■□□□ 1.16
C4BPAP04003 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
C4BPAP04003 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
C4BPAP04003 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.29■■□□□ 1.16
C4BPAP04003 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.29■■□□□ 1.16
C4BPAP04003 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.29■■□□□ 1.16
C4BPAP04003 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.29■■□□□ 1.16
C4BPAP04003 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C4BPAP04003 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.28■■□□□ 1.16
C4BPAP04003 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.28■■□□□ 1.16
C4BPAP04003 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.28■■□□□ 1.16
C4BPAP04003 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
C4BPAP04003 AC007322.1-201ENST00000426983 750 ntBASIC22.28■■□□□ 1.16
C4BPAP04003 AL162412.1-201ENST00000567129 965 ntBASIC22.28■■□□□ 1.16
C4BPAP04003 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.28■■□□□ 1.16
C4BPAP04003 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.28■■□□□ 1.16
C4BPAP04003 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C4BPAP04003 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.28■■□□□ 1.16
C4BPAP04003 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
C4BPAP04003 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.27■■□□□ 1.16
C4BPAP04003 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.27■■□□□ 1.16
C4BPAP04003 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.27■■□□□ 1.16
C4BPAP04003 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 AC007322.3-201ENST00000426526 701 ntBASIC22.27■■□□□ 1.16
C4BPAP04003 AC016405.3-201ENST00000607710 860 ntBASIC22.27■■□□□ 1.16
C4BPAP04003 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.27■■□□□ 1.16
C4BPAP04003 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4BPAP04003 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.27■■□□□ 1.16
C4BPAP04003 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms