Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.42■□□□□ 0.22
IFNA1P01562 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.42■□□□□ 0.22
IFNA1P01562 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.42■□□□□ 0.22
IFNA1P01562 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IFNA1P01562 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
IFNA1P01562 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IFNA1P01562 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFNA1P01562 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IFNA1P01562 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
IFNA1P01562 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.41■□□□□ 0.22
IFNA1P01562 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IFNA1P01562 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
IFNA1P01562 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 OR6D1P-202ENST00000641007 5290 ntBASIC16.41■□□□□ 0.22
IFNA1P01562 AC005703.6-201ENST00000623265 1329 ntBASIC16.41■□□□□ 0.22
IFNA1P01562 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
IFNA1P01562 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.41■□□□□ 0.22
IFNA1P01562 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.41■□□□□ 0.22
IFNA1P01562 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFNA1P01562 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.4■□□□□ 0.22
IFNA1P01562 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
IFNA1P01562 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
IFNA1P01562 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IFNA1P01562 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IFNA1P01562 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
IFNA1P01562 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IFNA1P01562 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.4■□□□□ 0.22
IFNA1P01562 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IFNA1P01562 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.4■□□□□ 0.22
IFNA1P01562 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.4■□□□□ 0.22
IFNA1P01562 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFNA1P01562 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
IFNA1P01562 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.39■□□□□ 0.21
IFNA1P01562 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.39■□□□□ 0.21
IFNA1P01562 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
IFNA1P01562 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
IFNA1P01562 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
IFNA1P01562 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFNA1P01562 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IFNA1P01562 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
IFNA1P01562 PLK5-205ENST00000642079 1969 ntBASIC16.38■□□□□ 0.21
IFNA1P01562 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms