Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIC3O95833 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC3O95833 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC3O95833 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC3O95833 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIC3O95833 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC3O95833 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 AP004607.7-201ENST00000527152 1677 ntBASIC19.13■□□□□ 0.65
CLIC3O95833 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CLIC3O95833 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC3O95833 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC3O95833 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC3O95833 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC3O95833 AP000974.1-201ENST00000623909 2387 ntBASIC19.12■□□□□ 0.65
CLIC3O95833 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC3O95833 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC3O95833 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC3O95833 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLIC3O95833 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC3O95833 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CLIC3O95833 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLIC3O95833 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLIC3O95833 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CLIC3O95833 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
CLIC3O95833 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC3O95833 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC3O95833 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLIC3O95833 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC3O95833 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC3O95833 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 AC004408.2-201ENST00000623613 2777 ntBASIC19.1■□□□□ 0.65
CLIC3O95833 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC3O95833 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 AL158211.5-201ENST00000623583 2518 ntBASIC19.1■□□□□ 0.65
CLIC3O95833 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIC3O95833 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLIC3O95833 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC3O95833 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC3O95833 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC3O95833 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC3O95833 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIC3O95833 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIC3O95833 AL034346.1-201ENST00000568244 1277 ntBASIC19.09■□□□□ 0.65
CLIC3O95833 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC3O95833 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
CLIC3O95833 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms