Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF1O95521 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.63■□□□□ 0.89
PRAMEF1O95521 TERF1P5-201ENST00000477545 1207 ntBASIC20.63■□□□□ 0.89
PRAMEF1O95521 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF1O95521 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF1O95521 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 AC004911.1-201ENST00000416316 871 ntBASIC20.62■□□□□ 0.89
PRAMEF1O95521 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRAMEF1O95521 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF1O95521 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 AC013268.1-206ENST00000638368 961 ntBASIC20.61■□□□□ 0.89
PRAMEF1O95521 AC112229.1-201ENST00000639295 961 ntBASIC20.61■□□□□ 0.89
PRAMEF1O95521 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF1O95521 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF1O95521 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRAMEF1O95521 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRAMEF1O95521 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PRAMEF1O95521 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.6■□□□□ 0.89
PRAMEF1O95521 AC091799.1-201ENST00000422823 811 ntBASIC20.6■□□□□ 0.89
PRAMEF1O95521 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF1O95521 DUX4L16-201ENST00000555130 1264 ntBASIC20.6■□□□□ 0.89
PRAMEF1O95521 AC092666.2-201ENST00000613287 246 ntBASIC20.6■□□□□ 0.89
PRAMEF1O95521 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF1O95521 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF1O95521 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF1O95521 AC121338.2-201ENST00000622535 1744 ntBASIC20.58■□□□□ 0.89
PRAMEF1O95521 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF1O95521 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF1O95521 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms