Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.71■□□□□ 0.43
SSX5O60225 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSX5O60225 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SSX5O60225 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SSX5O60225 KRT16P3-201ENST00000439127 1283 ntBASIC17.7■□□□□ 0.42
SSX5O60225 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.7■□□□□ 0.42
SSX5O60225 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX5O60225 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.7■□□□□ 0.42
SSX5O60225 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSX5O60225 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX5O60225 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.7■□□□□ 0.42
SSX5O60225 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SSX5O60225 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX5O60225 AFG3L1P-217ENST00000557444 2447 ntBASIC17.69■□□□□ 0.42
SSX5O60225 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SSX5O60225 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.69■□□□□ 0.42
SSX5O60225 PCDHAC2-203ENST00000615316 3011 ntBASIC17.69■□□□□ 0.42
SSX5O60225 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSX5O60225 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX5O60225 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX5O60225 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SSX5O60225 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSX5O60225 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX5O60225 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX5O60225 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX5O60225 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SSX5O60225 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SSX5O60225 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSX5O60225 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 AL356740.2-201ENST00000601559 647 ntBASIC17.68■□□□□ 0.42
SSX5O60225 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX5O60225 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSX5O60225 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX5O60225 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX5O60225 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
SSX5O60225 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX5O60225 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 AC121338.2-201ENST00000622535 1744 ntBASIC17.67■□□□□ 0.42
SSX5O60225 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SSX5O60225 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SSX5O60225 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.67■□□□□ 0.42
SSX5O60225 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SSX5O60225 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SSX5O60225 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SSX5O60225 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SSX5O60225 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX5O60225 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.67■□□□□ 0.42
SSX5O60225 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SSX5O60225 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX5O60225 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX5O60225 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSX5O60225 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX5O60225 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX5O60225 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms