Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBFD1O14562 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBFD1O14562 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.14■□□□□ 0.81
UBFD1O14562 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.14■□□□□ 0.81
UBFD1O14562 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
UBFD1O14562 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.14■□□□□ 0.81
UBFD1O14562 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBFD1O14562 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBFD1O14562 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBFD1O14562 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.13■□□□□ 0.81
UBFD1O14562 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.13■□□□□ 0.81
UBFD1O14562 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.13■□□□□ 0.81
UBFD1O14562 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
UBFD1O14562 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.13■□□□□ 0.81
UBFD1O14562 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
UBFD1O14562 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
UBFD1O14562 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
UBFD1O14562 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBFD1O14562 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.13■□□□□ 0.81
UBFD1O14562 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBFD1O14562 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBFD1O14562 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.12■□□□□ 0.81
UBFD1O14562 AL512408.1-201ENST00000569378 2000 ntBASIC20.12■□□□□ 0.81
UBFD1O14562 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.12■□□□□ 0.81
UBFD1O14562 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 AL354811.1-201ENST00000610286 706 ntBASIC20.12■□□□□ 0.81
UBFD1O14562 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.12■□□□□ 0.81
UBFD1O14562 AL162377.1-201ENST00000618844 1793 ntBASIC20.12■□□□□ 0.81
UBFD1O14562 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.12■□□□□ 0.81
UBFD1O14562 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBFD1O14562 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBFD1O14562 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBFD1O14562 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
UBFD1O14562 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.11■□□□□ 0.81
UBFD1O14562 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBFD1O14562 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBFD1O14562 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.11■□□□□ 0.81
UBFD1O14562 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.11■□□□□ 0.81
UBFD1O14562 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBFD1O14562 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.11■□□□□ 0.81
UBFD1O14562 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.11■□□□□ 0.81
UBFD1O14562 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.1■□□□□ 0.81
UBFD1O14562 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.1■□□□□ 0.81
UBFD1O14562 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
UBFD1O14562 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UBFD1O14562 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 MIR6084-201ENST00000622012 110 ntBASIC20.1■□□□□ 0.81
UBFD1O14562 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBFD1O14562 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.1■□□□□ 0.81
UBFD1O14562 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.1■□□□□ 0.81
UBFD1O14562 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UBFD1O14562 AC112907.3-201ENST00000577781 2400 ntBASIC20.1■□□□□ 0.81
UBFD1O14562 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.09■□□□□ 0.81
UBFD1O14562 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.09■□□□□ 0.81
UBFD1O14562 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 AFG3L1P-217ENST00000557444 2447 ntBASIC20.09■□□□□ 0.81
UBFD1O14562 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.09■□□□□ 0.81
UBFD1O14562 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBFD1O14562 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
UBFD1O14562 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms