Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.83■■□□□ 1.89
CHL1O00533 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.83■■□□□ 1.89
CHL1O00533 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHL1O00533 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHL1O00533 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHL1O00533 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHL1O00533 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.82■■□□□ 1.88
CHL1O00533 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHL1O00533 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.82■■□□□ 1.88
CHL1O00533 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.82■■□□□ 1.88
CHL1O00533 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.82■■□□□ 1.88
CHL1O00533 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.82■■□□□ 1.88
CHL1O00533 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.82■■□□□ 1.88
CHL1O00533 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CHL1O00533 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHL1O00533 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.82■■□□□ 1.88
CHL1O00533 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.82■■□□□ 1.88
CHL1O00533 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.81■■□□□ 1.88
CHL1O00533 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CHL1O00533 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
CHL1O00533 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 FEM1AP4-201ENST00000443167 1987 ntBASIC26.81■■□□□ 1.88
CHL1O00533 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CHL1O00533 AC069152.1-201ENST00000438030 544 ntBASIC26.81■■□□□ 1.88
CHL1O00533 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.81■■□□□ 1.88
CHL1O00533 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.81■■□□□ 1.88
CHL1O00533 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.81■■□□□ 1.88
CHL1O00533 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHL1O00533 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.8■■□□□ 1.88
CHL1O00533 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.8■■□□□ 1.88
CHL1O00533 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.8■■□□□ 1.88
CHL1O00533 AC092118.2-201ENST00000613495 667 ntBASIC26.8■■□□□ 1.88
CHL1O00533 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.8■■□□□ 1.88
CHL1O00533 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CHL1O00533 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CHL1O00533 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHL1O00533 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CHL1O00533 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHL1O00533 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHL1O00533 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHL1O00533 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHL1O00533 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CHL1O00533 BX276092.2-201ENST00000417668 665 ntBASIC26.79■■□□□ 1.88
CHL1O00533 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.79■■□□□ 1.88
CHL1O00533 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CHL1O00533 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CHL1O00533 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHL1O00533 AL049796.1-201ENST00000565336 1766 ntBASIC26.79■■□□□ 1.88
CHL1O00533 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.79■■□□□ 1.88
CHL1O00533 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.79■■□□□ 1.88
CHL1O00533 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CHL1O00533 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.78■■□□□ 1.88
CHL1O00533 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHL1O00533 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHL1O00533 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.78■■□□□ 1.88
CHL1O00533 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHL1O00533 AL355472.2-201ENST00000422958 438 ntBASIC26.78■■□□□ 1.88
CHL1O00533 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.78■■□□□ 1.88
CHL1O00533 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.78■■□□□ 1.88
CHL1O00533 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHL1O00533 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.78■■□□□ 1.88
CHL1O00533 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.78■■□□□ 1.88
CHL1O00533 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CHL1O00533 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.77■■□□□ 1.88
CHL1O00533 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 MIR4758-201ENST00000577688 71 ntBASIC26.77■■□□□ 1.88
CHL1O00533 CYP2T3P-201ENST00000601990 817 ntBASIC26.77■■□□□ 1.88
CHL1O00533 AC133041.1-202ENST00000642053 222 ntBASIC26.77■■□□□ 1.88
CHL1O00533 AC026310.3-201ENST00000625186 2373 ntBASIC26.77■■□□□ 1.88
CHL1O00533 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHL1O00533 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.76■■□□□ 1.88
CHL1O00533 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CHL1O00533 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
CHL1O00533 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.76■■□□□ 1.87
CHL1O00533 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHL1O00533 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHL1O00533 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHL1O00533 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CHL1O00533 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.76■■□□□ 1.87
CHL1O00533 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.76■■□□□ 1.87
CHL1O00533 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.76■■□□□ 1.87
CHL1O00533 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.76■■□□□ 1.87
CHL1O00533 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
CHL1O00533 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHL1O00533 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms