Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF11BO00300 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF11BO00300 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.14■□□□□ 0.66
TNFRSF11BO00300 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF11BO00300 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
TNFRSF11BO00300 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 MIR4466-201ENST00000606121 54 ntBASIC19.14■□□□□ 0.65
TNFRSF11BO00300 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF11BO00300 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 AC009237.3-201ENST00000393279 1427 ntBASIC19.13■□□□□ 0.65
TNFRSF11BO00300 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF11BO00300 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF11BO00300 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 AC133561.4-201ENST00000566112 224 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms