Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC188H7C350 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC188H7C350 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC188H7C350 AC011484.1-201ENST00000377652 1995 ntBASIC21.55■■□□□ 1.04
CCDC188H7C350 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC188H7C350 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 AC099778.1-201ENST00000568593 1911 ntBASIC21.55■■□□□ 1.04
CCDC188H7C350 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC188H7C350 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC188H7C350 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC188H7C350 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC188H7C350 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.54■■□□□ 1.04
CCDC188H7C350 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC188H7C350 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC188H7C350 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC188H7C350 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC188H7C350 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC188H7C350 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC188H7C350 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC188H7C350 BX842568.3-201ENST00000418104 571 ntBASIC21.53■■□□□ 1.04
CCDC188H7C350 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 MIR4466-201ENST00000606121 54 ntBASIC21.53■■□□□ 1.04
CCDC188H7C350 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC188H7C350 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CCDC188H7C350 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC188H7C350 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC188H7C350 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC188H7C350 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC188H7C350 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC188H7C350 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC188H7C350 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC188H7C350 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC188H7C350 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.52■■□□□ 1.04
CCDC188H7C350 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC188H7C350 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 AC112907.3-201ENST00000577781 2400 ntBASIC21.52■■□□□ 1.04
CCDC188H7C350 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC188H7C350 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC188H7C350 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC188H7C350 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC188H7C350 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC188H7C350 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC188H7C350 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC188H7C350 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC188H7C350 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC188H7C350 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC188H7C350 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC188H7C350 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC188H7C350 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC188H7C350 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC188H7C350 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC188H7C350 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC188H7C350 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC188H7C350 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC188H7C350 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC188H7C350 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC188H7C350 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC188H7C350 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC188H7C350 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC188H7C350 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC188H7C350 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms