Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 AC020916.1-201ENST00000587762 1774 ntBASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CHKB-CPT1BH3BT56 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 NOC2LP1-202ENST00000452600 2235 ntBASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CHKB-CPT1BH3BT56 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 LINC01006-201ENST00000333319 2292 ntBASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 FAM99A-202ENST00000538190 1989 ntBASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHKB-CPT1BH3BT56 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHKB-CPT1BH3BT56 BX323043.1-201ENST00000641006 1765 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms