Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRAMEF25A6NGN4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRAMEF25A6NGN4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 KRT19P1-201ENST00000405746 1186 ntBASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF25A6NGN4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 EEF1DP3-203ENST00000566025 782 ntBASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF25A6NGN4 AC073314.1-201ENST00000568729 2216 ntBASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 AC006128.1-201ENST00000624704 1661 ntBASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 AC053503.5-201ENST00000601508 636 ntBASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF25A6NGN4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 AP005212.1-201ENST00000581547 1997 ntBASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms