Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 AL512408.1-201ENST00000569378 2000 ntBASIC17.67■□□□□ 0.42
TMEM235A6NFC5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 SERBP1P1-201ENST00000396021 1160 ntBASIC17.66■□□□□ 0.42
TMEM235A6NFC5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 FP700111.2-201ENST00000619190 1892 ntBASIC17.66■□□□□ 0.42
TMEM235A6NFC5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM235A6NFC5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.65■□□□□ 0.42
TMEM235A6NFC5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM235A6NFC5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.64■□□□□ 0.42
TMEM235A6NFC5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 AL138724.1-201ENST00000606771 1088 ntBASIC17.64■□□□□ 0.41
TMEM235A6NFC5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 SYT6-210ENST00000641643 1587 ntBASIC17.64■□□□□ 0.41
TMEM235A6NFC5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM235A6NFC5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 AL512631.2-201ENST00000604634 923 ntBASIC17.63■□□□□ 0.41
TMEM235A6NFC5 AC136469.2-201ENST00000623944 1028 ntBASIC17.63■□□□□ 0.41
TMEM235A6NFC5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 AL162377.1-201ENST00000618844 1793 ntBASIC17.63■□□□□ 0.41
TMEM235A6NFC5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM235A6NFC5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms