Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.69■□□□□ 0.9
CCDC189A1A4V9 PBX2P1-201ENST00000493219 1291 ntBASIC20.69■□□□□ 0.9
CCDC189A1A4V9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 AC005224.4-201ENST00000583262 1652 ntBASIC20.68■□□□□ 0.9
CCDC189A1A4V9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 AC096631.2-201ENST00000436136 790 ntBASIC20.68■□□□□ 0.9
CCDC189A1A4V9 AC091305.1-201ENST00000479476 895 ntBASIC20.68■□□□□ 0.9
CCDC189A1A4V9 AP001330.3-201ENST00000520123 633 ntBASIC20.68■□□□□ 0.9
CCDC189A1A4V9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.68■□□□□ 0.9
CCDC189A1A4V9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC189A1A4V9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 TSPY26P-201ENST00000476365 1326 ntBASIC20.67■□□□□ 0.9
CCDC189A1A4V9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC189A1A4V9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 MIR939-201ENST00000401314 82 ntBASIC20.66■□□□□ 0.9
CCDC189A1A4V9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC189A1A4V9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC189A1A4V9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC189A1A4V9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC189A1A4V9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms