Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 AP005212.1-201ENST00000581547 1997 ntBASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.39■□□□□ 0.06
TRAV21A0A0B4J279 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 AC055733.4-201ENST00000638462 1354 ntBASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV21A0A0B4J279 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 AL136162.1-201ENST00000607711 1078 ntBASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 AC105233.4-201ENST00000642045 216 ntBASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 AC005224.4-201ENST00000583262 1652 ntBASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV21A0A0B4J279 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 AC024257.2-201ENST00000549699 147 ntBASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 AC135279.3-201ENST00000610945 1311 ntBASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV21A0A0B4J279 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms