Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-4A0A0B4J246 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-4A0A0B4J246 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-4A0A0B4J246 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAV8-4A0A0B4J246 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 AC024257.2-201ENST00000549699 147 ntBASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 AC126544.1-201ENST00000580842 1059 ntBASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-4A0A0B4J246 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-4A0A0B4J246 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 AC244015.2-201ENST00000616358 1861 ntBASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-4A0A0B4J246 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms