Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 TNXA-203ENST00000507684 2038 ntBASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 AL353803.4-201ENST00000565882 1934 ntBASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-2A0A087WT02 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 AL512631.2-201ENST00000604634 923 ntBASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 AC004408.2-201ENST00000623613 2777 ntBASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV9-2A0A087WT02 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 AC005082.1-201ENST00000413042 2259 ntBASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV9-2A0A087WT02 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 MIR4466-201ENST00000606121 54 ntBASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV9-2A0A087WT02 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms