Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 OR4K4P-201ENST00000556991 684 ntBASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 MIR3125-201ENST00000579927 78 ntBASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 RNASE9-211ENST00000611135 1108 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 AL139351.1-201ENST00000622092 320 ntBASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 LINC01667-203ENST00000623933 668 ntTSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 AL390726.6-203ENST00000636076 473 ntBASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 AC104758.3-204ENST00000567226 1493 ntTSL 5 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 SCRN3-202ENST00000409673 1788 ntTSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 CACNB4-206ENST00000439467 2159 ntTSL 5 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 AC022915.2-201ENST00000522575 2372 ntTSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 AC025280.2-201ENST00000625056 2547 ntBASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SYCE2Q6PIF2 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 CASP7-212ENST00000621607 2378 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 TCF4-209ENST00000544241 2264 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 CYP17A1-201ENST00000369887 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AL162274.3-201ENST00000623138 3109 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC009084.2-201ENST00000624046 2810 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 SIRPG-201ENST00000216927 831 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 HIST1H2BPS2-201ENST00000402707 340 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 RAET1M-201ENST00000405282 596 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC092373.1-201ENST00000414951 490 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC092474.1-201ENST00000416158 1167 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC233724.11-201ENST00000508480 404 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC008066.1-201ENST00000520373 863 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP001999.3-201ENST00000529922 455 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC027763.1-201ENST00000572223 720 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AP001767.4-201ENST00000624584 452 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 UXS1-202ENST00000409032 1935 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 KCNQ3-204ENST00000521134 2577 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ST8SIA6-AS1-201ENST00000377597 1811 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 AC016168.3-201ENST00000625040 3246 ntBASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 PLAGL1-204ENST00000367572 2496 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 LINC00662-201ENST00000561521 2480 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 THRB-201ENST00000280696 1718 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 MAPRE2-204ENST00000538170 4093 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 E2F8-202ENST00000527884 3432 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC10.32□□□□□ -0.76
SYCE2Q6PIF2 GNA12-202ENST00000407653 3785 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 LIPC-AS1-201ENST00000561083 2231 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 C14orf159-217ENST00000520328 2687 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 PPP1R12BP1-201ENST00000367272 1671 ntBASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 TRIM26-266ENST00000437089 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 PPP1R11-202ENST00000376763 1464 ntTSL 3 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCE2Q6PIF2 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms