RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
LINC00662-201ENST00000561521 PELP1Q8IZL8 1130 aaKnown RBP18.11■□□□□ 0.49
LINC00662-201ENST00000561521 MYT1Q01538 1121 aa17.86■□□□□ 0.45
LINC00662-201ENST00000561521 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
LINC00662-201ENST00000561521 HRCP23327 699 aa16.97■□□□□ 0.31
LINC00662-201ENST00000561521 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
LINC00662-201ENST00000561521 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
LINC00662-201ENST00000561521 ABCC9O60706 1549 aa16.43■□□□□ 0.22
LINC00662-201ENST00000561521 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
LINC00662-201ENST00000561521 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
LINC00662-201ENST00000561521 PRKCSHP14314 528 aaPredicted RBP16.07■□□□□ 0.16
LINC00662-201ENST00000561521 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
LINC00662-201ENST00000561521 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
LINC00662-201ENST00000561521 APLP2Q06481 763 aa15.96■□□□□ 0.15
LINC00662-201ENST00000561521 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
LINC00662-201ENST00000561521 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
LINC00662-201ENST00000561521 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
LINC00662-201ENST00000561521 NACADO15069 1562 aa15.9■□□□□ 0.14
LINC00662-201ENST00000561521 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
LINC00662-201ENST00000561521 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
LINC00662-201ENST00000561521 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
LINC00662-201ENST00000561521 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
LINC00662-201ENST00000561521 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
LINC00662-201ENST00000561521 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
LINC00662-201ENST00000561521 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
LINC00662-201ENST00000561521 FAM9AQ8IZU1 332 aaPredicted RBP15.71■□□□□ 0.1
LINC00662-201ENST00000561521 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
LINC00662-201ENST00000561521 NEUROD1Q13562 356 aa15.55■□□□□ 0.08
LINC00662-201ENST00000561521 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
LINC00662-201ENST00000561521 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
LINC00662-201ENST00000561521 ANP32EQ9BTT0 268 aa15.5■□□□□ 0.07
LINC00662-201ENST00000561521 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
LINC00662-201ENST00000561521 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
LINC00662-201ENST00000561521 TRIM26Q12899 539 aaPredicted RBP15.44■□□□□ 0.06
LINC00662-201ENST00000561521 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
LINC00662-201ENST00000561521 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
LINC00662-201ENST00000561521 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
LINC00662-201ENST00000561521 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00662-201ENST00000561521 SCRIBQ14160 1630 aa15.24■□□□□ 0.03
LINC00662-201ENST00000561521 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
LINC00662-201ENST00000561521 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
LINC00662-201ENST00000561521 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
LINC00662-201ENST00000561521 DAXXQ9UER7 740 aaPredicted RBP15.08■□□□□ 0
LINC00662-201ENST00000561521 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
LINC00662-201ENST00000561521 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
LINC00662-201ENST00000561521 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
LINC00662-201ENST00000561521 UBE2Q2Q8WVN8 375 aa14.95□□□□□ -0.02
LINC00662-201ENST00000561521 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
LINC00662-201ENST00000561521 KCNA4P22459 653 aa14.91□□□□□ -0.02
LINC00662-201ENST00000561521 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
LINC00662-201ENST00000561521 EIF5BO60841 1220 aaKnown RBP14.85□□□□□ -0.03
LINC00662-201ENST00000561521 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
LINC00662-201ENST00000561521 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
LINC00662-201ENST00000561521 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
LINC00662-201ENST00000561521 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
LINC00662-201ENST00000561521 SUPT16HQ9Y5B9 1047 aaKnown RBP14.71□□□□□ -0.05
LINC00662-201ENST00000561521 PHF23Q9BUL5 403 aaPredicted RBP14.69□□□□□ -0.06
LINC00662-201ENST00000561521 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
LINC00662-201ENST00000561521 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
LINC00662-201ENST00000561521 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
LINC00662-201ENST00000561521 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
LINC00662-201ENST00000561521 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
LINC00662-201ENST00000561521 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
LINC00662-201ENST00000561521 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
LINC00662-201ENST00000561521 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
LINC00662-201ENST00000561521 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
LINC00662-201ENST00000561521 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
LINC00662-201ENST00000561521 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.07
LINC00662-201ENST00000561521 LOC105371045A0A1W2PR82 267 aa14.51□□□□□ -0.09
LINC00662-201ENST00000561521 FANCIQ9NVI1 1328 aa14.49□□□□□ -0.09
LINC00662-201ENST00000561521 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
LINC00662-201ENST00000561521 PKNOX2Q96KN3 472 aa14.46□□□□□ -0.09
LINC00662-201ENST00000561521 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
LINC00662-201ENST00000561521 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
LINC00662-201ENST00000561521 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
LINC00662-201ENST00000561521 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
LINC00662-201ENST00000561521 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
LINC00662-201ENST00000561521 DEKP35659 375 aaKnown RBP14.42□□□□□ -0.1
LINC00662-201ENST00000561521 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
LINC00662-201ENST00000561521 MIER1Q8N108 512 aa14.4□□□□□ -0.1
LINC00662-201ENST00000561521 MSH5O43196 834 aa14.35□□□□□ -0.11
LINC00662-201ENST00000561521 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
LINC00662-201ENST00000561521 WIZO95785 1651 aa14.3□□□□□ -0.12
LINC00662-201ENST00000561521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
LINC00662-201ENST00000561521 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
LINC00662-201ENST00000561521 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
LINC00662-201ENST00000561521 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
LINC00662-201ENST00000561521 CUX2O14529 1486 aa14.23□□□□□ -0.13
LINC00662-201ENST00000561521 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
LINC00662-201ENST00000561521 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
LINC00662-201ENST00000561521 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
LINC00662-201ENST00000561521 NESP48681 1621 aa14.18□□□□□ -0.14
LINC00662-201ENST00000561521 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
LINC00662-201ENST00000561521 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
LINC00662-201ENST00000561521 NEFLP07196 543 aa14.15□□□□□ -0.14
LINC00662-201ENST00000561521 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
LINC00662-201ENST00000561521 GLIPR1L2Q4G1C9 344 aa14.14□□□□□ -0.15
LINC00662-201ENST00000561521 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
LINC00662-201ENST00000561521 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
LINC00662-201ENST00000561521 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms