RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
TCF4-209ENST00000544241 HRCP23327 699 aa17.45■□□□□ 0.38
TCF4-209ENST00000544241 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
TCF4-209ENST00000544241 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
TCF4-209ENST00000544241 MYT1Q01538 1121 aa16.89■□□□□ 0.29
TCF4-209ENST00000544241 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
TCF4-209ENST00000544241 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.27
TCF4-209ENST00000544241 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
TCF4-209ENST00000544241 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
TCF4-209ENST00000544241 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
TCF4-209ENST00000544241 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
TCF4-209ENST00000544241 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
TCF4-209ENST00000544241 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
TCF4-209ENST00000544241 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
TCF4-209ENST00000544241 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
TCF4-209ENST00000544241 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.2
TCF4-209ENST00000544241 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
TCF4-209ENST00000544241 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
TCF4-209ENST00000544241 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
TCF4-209ENST00000544241 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
TCF4-209ENST00000544241 GTF3C3Q9Y5Q9 886 aa15.95■□□□□ 0.14
TCF4-209ENST00000544241 TTBK1Q5TCY1 1321 aaPredicted RBP15.92■□□□□ 0.14
TCF4-209ENST00000544241 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
TCF4-209ENST00000544241 ABCC9O60706 1549 aa15.73■□□□□ 0.11
TCF4-209ENST00000544241 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
TCF4-209ENST00000544241 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
TCF4-209ENST00000544241 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
TCF4-209ENST00000544241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
TCF4-209ENST00000544241 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
TCF4-209ENST00000544241 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
TCF4-209ENST00000544241 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
TCF4-209ENST00000544241 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
TCF4-209ENST00000544241 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
TCF4-209ENST00000544241 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
TCF4-209ENST00000544241 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
TCF4-209ENST00000544241 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
TCF4-209ENST00000544241 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
TCF4-209ENST00000544241 NACADO15069 1562 aa15.28■□□□□ 0.04
TCF4-209ENST00000544241 MIER1Q8N108 512 aa15.26■□□□□ 0.03
TCF4-209ENST00000544241 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
TCF4-209ENST00000544241 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
TCF4-209ENST00000544241 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
TCF4-209ENST00000544241 CEP162Q5TB80 1403 aa15.05■□□□□ -0
TCF4-209ENST00000544241 SCRIBQ14160 1630 aa15.04■□□□□ -0
TCF4-209ENST00000544241 CSRNP3Q8WYN3 585 aa15.02□□□□□ -0.01
TCF4-209ENST00000544241 TNIKQ9UKE5 1360 aa15.02□□□□□ -0.01
TCF4-209ENST00000544241 EEA1Q15075 1411 aa14.95□□□□□ -0.02
TCF4-209ENST00000544241 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
TCF4-209ENST00000544241 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
TCF4-209ENST00000544241 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
TCF4-209ENST00000544241 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
TCF4-209ENST00000544241 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
TCF4-209ENST00000544241 ERICH6Q7L0X2 663 aa14.83□□□□□ -0.03
TCF4-209ENST00000544241 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
TCF4-209ENST00000544241 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
TCF4-209ENST00000544241 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
TCF4-209ENST00000544241 NEFLP07196 543 aa14.8□□□□□ -0.04
TCF4-209ENST00000544241 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
TCF4-209ENST00000544241 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
TCF4-209ENST00000544241 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
TCF4-209ENST00000544241 APLP2Q06481 763 aa14.77□□□□□ -0.05
TCF4-209ENST00000544241 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
TCF4-209ENST00000544241 WIZO95785 1651 aa14.75□□□□□ -0.05
TCF4-209ENST00000544241 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
TCF4-209ENST00000544241 PRKCSHP14314 528 aaPredicted RBP14.74□□□□□ -0.05
TCF4-209ENST00000544241 FKBP8Q14318 412 aa14.73□□□□□ -0.05
TCF4-209ENST00000544241 SOGA1O94964 1423 aa14.7□□□□□ -0.06
TCF4-209ENST00000544241 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
TCF4-209ENST00000544241 FANCIQ9NVI1 1328 aa14.69□□□□□ -0.06
TCF4-209ENST00000544241 VPS8Q8N3P4 1428 aa14.69□□□□□ -0.06
TCF4-209ENST00000544241 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
TCF4-209ENST00000544241 BCANQ96GW7 911 aa14.68□□□□□ -0.06
TCF4-209ENST00000544241 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
TCF4-209ENST00000544241 CLIP1P30622 1438 aa14.64□□□□□ -0.07
TCF4-209ENST00000544241 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
TCF4-209ENST00000544241 KIF21BO75037 1637 aa14.61□□□□□ -0.07
TCF4-209ENST00000544241 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
TCF4-209ENST00000544241 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
TCF4-209ENST00000544241 MSH5O43196 834 aa14.56□□□□□ -0.08
TCF4-209ENST00000544241 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
TCF4-209ENST00000544241 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
TCF4-209ENST00000544241 CUX2O14529 1486 aa14.51□□□□□ -0.09
TCF4-209ENST00000544241 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
TCF4-209ENST00000544241 ERICH6BQ5W0A0 696 aa14.5□□□□□ -0.09
TCF4-209ENST00000544241 KCNH8Q96L42 1107 aa14.49□□□□□ -0.09
TCF4-209ENST00000544241 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
TCF4-209ENST00000544241 ITGAEP38570 1179 aa14.46□□□□□ -0.09
TCF4-209ENST00000544241 ANP32CO43423 234 aa14.45□□□□□ -0.1
TCF4-209ENST00000544241 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
TCF4-209ENST00000544241 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
TCF4-209ENST00000544241 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
TCF4-209ENST00000544241 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
TCF4-209ENST00000544241 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
TCF4-209ENST00000544241 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
TCF4-209ENST00000544241 CCNB3Q8WWL7 1395 aa14.35□□□□□ -0.11
TCF4-209ENST00000544241 RAPGEF2Q9Y4G8 1499 aa14.33□□□□□ -0.11
TCF4-209ENST00000544241 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
TCF4-209ENST00000544241 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
TCF4-209ENST00000544241 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
TCF4-209ENST00000544241 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms