RNA–Protein interactions for RNA: ENST00000262444.13

ARHGAP44-201, Transcript of Rho GTPase activating protein 44, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGAP44, Length 3,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP44-201ENST00000262444 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
ARHGAP44-201ENST00000262444 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
ARHGAP44-201ENST00000262444 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
ARHGAP44-201ENST00000262444 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
ARHGAP44-201ENST00000262444 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
ARHGAP44-201ENST00000262444 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
ARHGAP44-201ENST00000262444 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
ARHGAP44-201ENST00000262444 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
ARHGAP44-201ENST00000262444 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
ARHGAP44-201ENST00000262444 HRCP23327 699 aa18.2■□□□□ 0.5
ARHGAP44-201ENST00000262444 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
ARHGAP44-201ENST00000262444 ABCC9O60706 1549 aa18.11■□□□□ 0.49
ARHGAP44-201ENST00000262444 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
ARHGAP44-201ENST00000262444 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
ARHGAP44-201ENST00000262444 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
ARHGAP44-201ENST00000262444 NACADO15069 1562 aa17.9■□□□□ 0.46
ARHGAP44-201ENST00000262444 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
ARHGAP44-201ENST00000262444 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
ARHGAP44-201ENST00000262444 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
ARHGAP44-201ENST00000262444 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
ARHGAP44-201ENST00000262444 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
ARHGAP44-201ENST00000262444 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
ARHGAP44-201ENST00000262444 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
ARHGAP44-201ENST00000262444 WIZO95785 1651 aa17.61■□□□□ 0.41
ARHGAP44-201ENST00000262444 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
ARHGAP44-201ENST00000262444 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
ARHGAP44-201ENST00000262444 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
ARHGAP44-201ENST00000262444 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
ARHGAP44-201ENST00000262444 SMARCA4P51532 1647 aa17.33■□□□□ 0.37
ARHGAP44-201ENST00000262444 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
ARHGAP44-201ENST00000262444 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
ARHGAP44-201ENST00000262444 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
ARHGAP44-201ENST00000262444 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
ARHGAP44-201ENST00000262444 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
ARHGAP44-201ENST00000262444 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
ARHGAP44-201ENST00000262444 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
ARHGAP44-201ENST00000262444 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
ARHGAP44-201ENST00000262444 SOGA1O94964 1423 aa17.03■□□□□ 0.32
ARHGAP44-201ENST00000262444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
ARHGAP44-201ENST00000262444 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
ARHGAP44-201ENST00000262444 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
ARHGAP44-201ENST00000262444 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
ARHGAP44-201ENST00000262444 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
ARHGAP44-201ENST00000262444 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
ARHGAP44-201ENST00000262444 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
ARHGAP44-201ENST00000262444 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
ARHGAP44-201ENST00000262444 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
ARHGAP44-201ENST00000262444 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
ARHGAP44-201ENST00000262444 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
ARHGAP44-201ENST00000262444 EEA1Q15075 1411 aa16.89■□□□□ 0.29
ARHGAP44-201ENST00000262444 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
ARHGAP44-201ENST00000262444 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
ARHGAP44-201ENST00000262444 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
ARHGAP44-201ENST00000262444 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
ARHGAP44-201ENST00000262444 MYT1Q01538 1121 aa16.78■□□□□ 0.28
ARHGAP44-201ENST00000262444 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
ARHGAP44-201ENST00000262444 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
ARHGAP44-201ENST00000262444 NEUROD1Q13562 356 aa16.67■□□□□ 0.26
ARHGAP44-201ENST00000262444 ACIN1Q9UKV3 1341 aaKnown RBP16.67■□□□□ 0.26
ARHGAP44-201ENST00000262444 KIF21BO75037 1637 aa16.66■□□□□ 0.26
ARHGAP44-201ENST00000262444 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
ARHGAP44-201ENST00000262444 CLIP1P30622 1438 aa16.63■□□□□ 0.25
ARHGAP44-201ENST00000262444 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
ARHGAP44-201ENST00000262444 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
ARHGAP44-201ENST00000262444 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
ARHGAP44-201ENST00000262444 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
ARHGAP44-201ENST00000262444 APLP2Q06481 763 aa16.54■□□□□ 0.24
ARHGAP44-201ENST00000262444 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
ARHGAP44-201ENST00000262444 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
ARHGAP44-201ENST00000262444 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.23
ARHGAP44-201ENST00000262444 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
ARHGAP44-201ENST00000262444 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
ARHGAP44-201ENST00000262444 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
ARHGAP44-201ENST00000262444 CUX1P39880 1505 aa16.46■□□□□ 0.23
ARHGAP44-201ENST00000262444 CFTRP13569 1480 aa16.43■□□□□ 0.22
ARHGAP44-201ENST00000262444 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
ARHGAP44-201ENST00000262444 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
ARHGAP44-201ENST00000262444 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
ARHGAP44-201ENST00000262444 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
ARHGAP44-201ENST00000262444 ARAP1Q96P48 1450 aa16.34■□□□□ 0.21
ARHGAP44-201ENST00000262444 MIER1Q8N108 512 aa16.32■□□□□ 0.2
ARHGAP44-201ENST00000262444 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
ARHGAP44-201ENST00000262444 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
ARHGAP44-201ENST00000262444 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
ARHGAP44-201ENST00000262444 CUX2O14529 1486 aa16.27■□□□□ 0.19
ARHGAP44-201ENST00000262444 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
ARHGAP44-201ENST00000262444 IGF1RP08069 1367 aa16.21■□□□□ 0.19
ARHGAP44-201ENST00000262444 CC2D2AQ9P2K1 1620 aa16.21■□□□□ 0.19
ARHGAP44-201ENST00000262444 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
ARHGAP44-201ENST00000262444 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
ARHGAP44-201ENST00000262444 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
ARHGAP44-201ENST00000262444 ITGAEP38570 1179 aa16.13■□□□□ 0.17
ARHGAP44-201ENST00000262444 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
ARHGAP44-201ENST00000262444 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
ARHGAP44-201ENST00000262444 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
ARHGAP44-201ENST00000262444 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
ARHGAP44-201ENST00000262444 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
ARHGAP44-201ENST00000262444 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
ARHGAP44-201ENST00000262444 NESP48681 1621 aa16.06■□□□□ 0.16
ARHGAP44-201ENST00000262444 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms