Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 EDAR-202ENST00000376651 4303 ntTSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 TRIM43B-202ENST00000639673 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 RBM48-201ENST00000265732 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC023078.6-201ENST00000525272 1718 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 KIAA0087-201ENST00000242109 4283 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 TAC4-202ENST00000334568 675 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 C5orf56-202ENST00000378947 621 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AL136309.3-201ENST00000427591 266 ntTSL 3 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 OR2S1P-201ENST00000447226 950 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 DUBR-203ENST00000473550 738 ntTSL 3 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC027369.4-201ENST00000534243 816 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AC099343.2-201ENST00000605082 686 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 MIR7850-201ENST00000618087 79 ntBASIC10.47□□□□□ -0.73
LMO3Q8TAP4 TARS-216ENST00000627006 171 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 CLVS2-202ENST00000368438 1359 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 SORD-203ENST00000558580 1395 ntTSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 KLF8-204ENST00000468660 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC10.47□□□□□ -0.73
LMO3Q8TAP4 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 PTCH1-206ENST00000421141 7659 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SNX19P1-201ENST00000444901 2981 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SLC22A2-201ENST00000366952 3737 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC246785.1-201ENST00000440916 264 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 CFL1P3-201ENST00000440942 490 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 IGKV1D-39-201ENST00000448155 376 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC245884.4-201ENST00000450173 472 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 HNRNPA1P47-201ENST00000453073 931 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 SSR2-213ENST00000496742 825 ntTSL 3 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC024451.2-201ENST00000519856 1108 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 HOXA-AS2-206ENST00000521159 800 ntTSL 3 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 VENTXP6-201ENST00000521543 314 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA3-201ENST00000526520 954 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA2-201ENST00000529166 1110 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC140847.3-201ENST00000542491 708 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 C1RL-211ENST00000545280 449 ntTSL 3 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC027682.4-202ENST00000565929 515 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 HNRNPA1P52-201ENST00000599047 947 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AL139093.1-201ENST00000622029 1014 ntBASIC10.46□□□□□ -0.73
LMO3Q8TAP4 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LMO3Q8TAP4 AC005005.3-201ENST00000609017 1410 ntBASIC10.46□□□□□ -0.74
LMO3Q8TAP4 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LMO3Q8TAP4 URM1-204ENST00000452446 2944 ntTSL 2 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms