RNA–Protein interactions for RNA: ENST00000519937.6

SFTPB-207, Transcript of surfactant protein B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFTPB, Length 3,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPB-207ENST00000519937 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
SFTPB-207ENST00000519937 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
SFTPB-207ENST00000519937 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
SFTPB-207ENST00000519937 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
SFTPB-207ENST00000519937 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
SFTPB-207ENST00000519937 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
SFTPB-207ENST00000519937 ABCC9O60706 1549 aa17.17■□□□□ 0.34
SFTPB-207ENST00000519937 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
SFTPB-207ENST00000519937 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
SFTPB-207ENST00000519937 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
SFTPB-207ENST00000519937 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
SFTPB-207ENST00000519937 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
SFTPB-207ENST00000519937 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
SFTPB-207ENST00000519937 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
SFTPB-207ENST00000519937 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
SFTPB-207ENST00000519937 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
SFTPB-207ENST00000519937 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
SFTPB-207ENST00000519937 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
SFTPB-207ENST00000519937 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
SFTPB-207ENST00000519937 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.17
SFTPB-207ENST00000519937 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
SFTPB-207ENST00000519937 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
SFTPB-207ENST00000519937 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
SFTPB-207ENST00000519937 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
SFTPB-207ENST00000519937 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.11
SFTPB-207ENST00000519937 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
SFTPB-207ENST00000519937 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
SFTPB-207ENST00000519937 NACADO15069 1562 aa15.72■□□□□ 0.11
SFTPB-207ENST00000519937 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.1
SFTPB-207ENST00000519937 DCAF1Q9Y4B6 1507 aa15.69■□□□□ 0.1
SFTPB-207ENST00000519937 WIZO95785 1651 aa15.62■□□□□ 0.09
SFTPB-207ENST00000519937 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
SFTPB-207ENST00000519937 ITGAEP38570 1179 aa15.47■□□□□ 0.07
SFTPB-207ENST00000519937 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
SFTPB-207ENST00000519937 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
SFTPB-207ENST00000519937 HRCP23327 699 aa15.44■□□□□ 0.06
SFTPB-207ENST00000519937 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
SFTPB-207ENST00000519937 APLP2Q06481 763 aa15.42■□□□□ 0.06
SFTPB-207ENST00000519937 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SFTPB-207ENST00000519937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
SFTPB-207ENST00000519937 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
SFTPB-207ENST00000519937 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
SFTPB-207ENST00000519937 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
SFTPB-207ENST00000519937 SOGA1O94964 1423 aa15.34■□□□□ 0.05
SFTPB-207ENST00000519937 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
SFTPB-207ENST00000519937 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
SFTPB-207ENST00000519937 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
SFTPB-207ENST00000519937 FBLN2P98095 1184 aa15.27■□□□□ 0.03
SFTPB-207ENST00000519937 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
SFTPB-207ENST00000519937 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
SFTPB-207ENST00000519937 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
SFTPB-207ENST00000519937 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
SFTPB-207ENST00000519937 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
SFTPB-207ENST00000519937 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
SFTPB-207ENST00000519937 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
SFTPB-207ENST00000519937 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
SFTPB-207ENST00000519937 SMARCA2P51531 1590 aa15.04■□□□□ -0
SFTPB-207ENST00000519937 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
SFTPB-207ENST00000519937 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
SFTPB-207ENST00000519937 NESP48681 1621 aa14.97□□□□□ -0.01
SFTPB-207ENST00000519937 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
SFTPB-207ENST00000519937 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
SFTPB-207ENST00000519937 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
SFTPB-207ENST00000519937 KCNA4P22459 653 aa14.91□□□□□ -0.02
SFTPB-207ENST00000519937 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
SFTPB-207ENST00000519937 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
SFTPB-207ENST00000519937 CLIP1P30622 1438 aa14.87□□□□□ -0.03
SFTPB-207ENST00000519937 CUX2O14529 1486 aa14.86□□□□□ -0.03
SFTPB-207ENST00000519937 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
SFTPB-207ENST00000519937 KANK4Q5T7N3 995 aaPredicted RBP14.84□□□□□ -0.03
SFTPB-207ENST00000519937 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
SFTPB-207ENST00000519937 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
SFTPB-207ENST00000519937 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
SFTPB-207ENST00000519937 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
SFTPB-207ENST00000519937 RAD54L2Q9Y4B4 1467 aa14.8□□□□□ -0.04
SFTPB-207ENST00000519937 CHIC2Q9UKJ5 165 aa14.77□□□□□ -0.04
SFTPB-207ENST00000519937 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
SFTPB-207ENST00000519937 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
SFTPB-207ENST00000519937 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
SFTPB-207ENST00000519937 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
SFTPB-207ENST00000519937 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
SFTPB-207ENST00000519937 HIRIP3Q9BW71 556 aaPredicted RBP14.7□□□□□ -0.06
SFTPB-207ENST00000519937 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
SFTPB-207ENST00000519937 CARMIL1Q5VZK9 1371 aa14.69□□□□□ -0.06
SFTPB-207ENST00000519937 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
SFTPB-207ENST00000519937 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
SFTPB-207ENST00000519937 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
SFTPB-207ENST00000519937 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
SFTPB-207ENST00000519937 MYT1LQ9UL68 1186 aa14.65□□□□□ -0.06
SFTPB-207ENST00000519937 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
SFTPB-207ENST00000519937 TRIM52Q96A61 297 aa14.63□□□□□ -0.07
SFTPB-207ENST00000519937 CUX1P39880 1505 aa14.61□□□□□ -0.07
SFTPB-207ENST00000519937 POLR3GLQ9BT43 218 aa14.61□□□□□ -0.07
SFTPB-207ENST00000519937 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
SFTPB-207ENST00000519937 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.07
SFTPB-207ENST00000519937 FHOD3Q2V2M9 1422 aa14.58□□□□□ -0.08
SFTPB-207ENST00000519937 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.08
SFTPB-207ENST00000519937 IGF1RP08069 1367 aa14.57□□□□□ -0.08
SFTPB-207ENST00000519937 CFTRP13569 1480 aa14.56□□□□□ -0.08
SFTPB-207ENST00000519937 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms