RNA–Protein interactions for RNA: ENST00000508790.1

LINC02509-201, Transcript of long intergenic non-protein coding RNA 2509, humanhuman

TSL 3 BASIC

Gene LINC02509, Length 691 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02509-201ENST00000508790 AEBP2Q6ZN18 517 aaPredicted RBP32.98■■■□□ 2.87
LINC02509-201ENST00000508790 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
LINC02509-201ENST00000508790 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
LINC02509-201ENST00000508790 PHF23Q9BUL5 403 aaPredicted RBP27.83■■■□□ 2.05
LINC02509-201ENST00000508790 FOXD1Q16676 465 aa26.29■■□□□ 1.8
LINC02509-201ENST00000508790 PLPPR3Q6T4P5 718 aa24.95■■□□□ 1.58
LINC02509-201ENST00000508790 MSH5O43196 834 aa24.78■■□□□ 1.56
LINC02509-201ENST00000508790 PIAS4Q8N2W9 510 aaPredicted RBP24.58■■□□□ 1.53
LINC02509-201ENST00000508790 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
LINC02509-201ENST00000508790 ADRA2BP18089 450 aa24.34■■□□□ 1.49
LINC02509-201ENST00000508790 POTEDQ86YR6 584 aa24.34■■□□□ 1.49
LINC02509-201ENST00000508790 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
LINC02509-201ENST00000508790 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
LINC02509-201ENST00000508790 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
LINC02509-201ENST00000508790 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
LINC02509-201ENST00000508790 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
LINC02509-201ENST00000508790 HOXD11P31277 338 aaPredicted RBP21.5■■□□□ 1.03
LINC02509-201ENST00000508790 CNKSR2Q8WXI2 1034 aa21.47■■□□□ 1.03
LINC02509-201ENST00000508790 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
LINC02509-201ENST00000508790 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
LINC02509-201ENST00000508790 CACNB1Q02641 598 aaPredicted RBP21.3■■□□□ 1
LINC02509-201ENST00000508790 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
LINC02509-201ENST00000508790 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
LINC02509-201ENST00000508790 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
LINC02509-201ENST00000508790 C1QBPQ07021 282 aaKnown RBP20.81■□□□□ 0.92
LINC02509-201ENST00000508790 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
LINC02509-201ENST00000508790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
LINC02509-201ENST00000508790 KCNA4P22459 653 aa20.04■□□□□ 0.8
LINC02509-201ENST00000508790 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
LINC02509-201ENST00000508790 CAPN15O75808 1086 aa19.76■□□□□ 0.75
LINC02509-201ENST00000508790 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
LINC02509-201ENST00000508790 SLC4A2P04920 1241 aa19.68■□□□□ 0.74
LINC02509-201ENST00000508790 DSG3P32926 999 aa19.66■□□□□ 0.74
LINC02509-201ENST00000508790 APLP2Q06481 763 aa19.6■□□□□ 0.73
LINC02509-201ENST00000508790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
LINC02509-201ENST00000508790 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
LINC02509-201ENST00000508790 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
LINC02509-201ENST00000508790 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
LINC02509-201ENST00000508790 SAMD1Q6SPF0 538 aaPredicted RBP19.37■□□□□ 0.69
LINC02509-201ENST00000508790 ABCB7O75027 752 aa19.24■□□□□ 0.67
LINC02509-201ENST00000508790 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
LINC02509-201ENST00000508790 POTEHQ6S545 545 aa19.07■□□□□ 0.64
LINC02509-201ENST00000508790 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
LINC02509-201ENST00000508790 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
LINC02509-201ENST00000508790 POLA2Q14181 598 aa18.83■□□□□ 0.6
LINC02509-201ENST00000508790 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
LINC02509-201ENST00000508790 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
LINC02509-201ENST00000508790 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
LINC02509-201ENST00000508790 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
LINC02509-201ENST00000508790 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
LINC02509-201ENST00000508790 ZBTB22O15209 634 aa18.39■□□□□ 0.53
LINC02509-201ENST00000508790 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
LINC02509-201ENST00000508790 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
LINC02509-201ENST00000508790 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
LINC02509-201ENST00000508790 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
LINC02509-201ENST00000508790 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
LINC02509-201ENST00000508790 FBLN2P98095 1184 aa18.01■□□□□ 0.47
LINC02509-201ENST00000508790 PITPNM1O00562 1244 aa17.94■□□□□ 0.46
LINC02509-201ENST00000508790 PIP4P2Q8N4L2 257 aa17.94■□□□□ 0.46
LINC02509-201ENST00000508790 SPDYE2BA6NHP3 402 aa17.93■□□□□ 0.46
LINC02509-201ENST00000508790 SPDYE6P0CI01 402 aa17.93■□□□□ 0.46
LINC02509-201ENST00000508790 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
LINC02509-201ENST00000508790 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
LINC02509-201ENST00000508790 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC02509-201ENST00000508790 SP7Q8TDD2 431 aaPredicted RBP17.83■□□□□ 0.44
LINC02509-201ENST00000508790 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
LINC02509-201ENST00000508790 HAX1O00165 279 aa17.68■□□□□ 0.42
LINC02509-201ENST00000508790 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
LINC02509-201ENST00000508790 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
LINC02509-201ENST00000508790 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
LINC02509-201ENST00000508790 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
LINC02509-201ENST00000508790 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
LINC02509-201ENST00000508790 ABCC9O60706 1549 aa17.57■□□□□ 0.4
LINC02509-201ENST00000508790 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
LINC02509-201ENST00000508790 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
LINC02509-201ENST00000508790 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
LINC02509-201ENST00000508790 NACADO15069 1562 aa17.48■□□□□ 0.39
LINC02509-201ENST00000508790 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
LINC02509-201ENST00000508790 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC02509-201ENST00000508790 EVX2Q03828 476 aa17.34■□□□□ 0.37
LINC02509-201ENST00000508790 PRR29P0C7W0 189 aa17.29■□□□□ 0.36
LINC02509-201ENST00000508790 C19orf67A6NJJ6 358 aa17.27■□□□□ 0.36
LINC02509-201ENST00000508790 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.35
LINC02509-201ENST00000508790 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
LINC02509-201ENST00000508790 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
LINC02509-201ENST00000508790 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
LINC02509-201ENST00000508790 GABBR2O75899 941 aa17.03■□□□□ 0.32
LINC02509-201ENST00000508790 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
LINC02509-201ENST00000508790 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
LINC02509-201ENST00000508790 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
LINC02509-201ENST00000508790 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
LINC02509-201ENST00000508790 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
LINC02509-201ENST00000508790 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
LINC02509-201ENST00000508790 CLCN6P51797 869 aa16.87■□□□□ 0.29
LINC02509-201ENST00000508790 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
LINC02509-201ENST00000508790 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
LINC02509-201ENST00000508790 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
LINC02509-201ENST00000508790 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
LINC02509-201ENST00000508790 LHX8Q68G74 356 aa16.7■□□□□ 0.26
LINC02509-201ENST00000508790 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms