Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SNX18Q96RF0 AC006213.1-201ENST00000586860 2550 ntTSL 2 BASIC9.15□□□□□ -0.95
SNX18Q96RF0 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SNX18Q96RF0 FAM41C-203ENST00000446136 1807 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SNX18Q96RF0 AC006213.2-201ENST00000587128 2193 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AP004290.1-201ENST00000440915 1412 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 IFT46-202ENST00000264021 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 HACL1-207ENST00000451445 1734 ntTSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 RFC4-201ENST00000296273 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 HSFY2-203ENST00000382852 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 VIPAS39-201ENST00000327028 2614 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC099811.6-201ENST00000624554 1638 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 RPL23-201ENST00000245857 588 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 OR2F2-201ENST00000408955 1114 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AL390294.1-201ENST00000418270 402 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AL135937.1-201ENST00000418690 729 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 MYOSLID-201ENST00000430494 974 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC090286.2-201ENST00000434303 587 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 RPL18AP7-201ENST00000435924 524 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 MS4A13-203ENST00000437058 751 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 HGF-208ENST00000453411 1111 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 TAMM41-206ENST00000455809 1213 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC022364.1-201ENST00000473753 739 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC025752.1-201ENST00000503317 558 ntTSL 4 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 LINC02108-201ENST00000504333 1184 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC008429.3-201ENST00000519755 489 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 IGLV2-5-201ENST00000522922 277 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 AAMDC-204ENST00000525409 421 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC073176.1-202ENST00000558852 409 ntTSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 PCAT29-203ENST00000559212 647 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 FLJ21408-202ENST00000565060 565 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC099524.1-207ENST00000569731 794 ntTSL 3 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC021224.1-201ENST00000573479 857 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 LINC00649-211ENST00000600155 1108 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 WISP3-208ENST00000604763 1250 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC008972.1-201ENST00000607027 640 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 LINC01954-201ENST00000607419 461 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AC233702.10-201ENST00000426261 2780 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 AF001548.3-201ENST00000624545 1743 ntBASIC9.14□□□□□ -0.95
SNX18Q96RF0 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SNX18Q96RF0 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SNX18Q96RF0 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZFP69-201ENST00000372705 2104 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 STRADA-225ENST00000638193 1342 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AL513220.1-201ENST00000641190 1326 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TGIF2LX-201ENST00000283891 906 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 OR4K14-201ENST00000305045 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 IGHV1-69-201ENST00000390633 412 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TMEM139-203ENST00000409244 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AL033527.2-201ENST00000418255 785 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 HNRNPH3P1-201ENST00000431935 583 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 CSTP1-201ENST00000433681 419 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 BX072579.2-201ENST00000455857 525 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AL161785.1-201ENST00000455981 583 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 RN7SL253P-201ENST00000476759 296 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC026117.1-201ENST00000509658 883 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 LINC00051-201ENST00000517704 1046 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms