RNA–Protein interactions for RNA: ENST00000307792.7

SEMA3E-201, Transcript of semaphorin 3E, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3E, Length 6,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3E-201ENST00000307792 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
SEMA3E-201ENST00000307792 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
SEMA3E-201ENST00000307792 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
SEMA3E-201ENST00000307792 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
SEMA3E-201ENST00000307792 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
SEMA3E-201ENST00000307792 APLP2Q06481 763 aa16.26■□□□□ 0.19
SEMA3E-201ENST00000307792 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
SEMA3E-201ENST00000307792 ABCC9O60706 1549 aa16.17■□□□□ 0.18
SEMA3E-201ENST00000307792 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
SEMA3E-201ENST00000307792 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
SEMA3E-201ENST00000307792 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
SEMA3E-201ENST00000307792 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
SEMA3E-201ENST00000307792 TTBK1Q5TCY1 1321 aaPredicted RBP15.88■□□□□ 0.13
SEMA3E-201ENST00000307792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
SEMA3E-201ENST00000307792 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
SEMA3E-201ENST00000307792 FBLN2P98095 1184 aa15.59■□□□□ 0.09
SEMA3E-201ENST00000307792 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
SEMA3E-201ENST00000307792 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
SEMA3E-201ENST00000307792 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
SEMA3E-201ENST00000307792 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
SEMA3E-201ENST00000307792 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
SEMA3E-201ENST00000307792 BCANQ96GW7 911 aa15.13■□□□□ 0.01
SEMA3E-201ENST00000307792 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
SEMA3E-201ENST00000307792 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
SEMA3E-201ENST00000307792 ERCC6Q03468 1493 aa15.04■□□□□ -0
SEMA3E-201ENST00000307792 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
SEMA3E-201ENST00000307792 SCRIBQ14160 1630 aa15□□□□□ -0.01
SEMA3E-201ENST00000307792 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
SEMA3E-201ENST00000307792 ITGAEP38570 1179 aa14.91□□□□□ -0.02
SEMA3E-201ENST00000307792 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
SEMA3E-201ENST00000307792 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
SEMA3E-201ENST00000307792 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
SEMA3E-201ENST00000307792 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
SEMA3E-201ENST00000307792 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
SEMA3E-201ENST00000307792 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
SEMA3E-201ENST00000307792 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
SEMA3E-201ENST00000307792 ARID3CA6NKF2 412 aa14.77□□□□□ -0.04
SEMA3E-201ENST00000307792 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
SEMA3E-201ENST00000307792 ARID4BQ4LE39 1312 aaPredicted RBP14.73□□□□□ -0.05
SEMA3E-201ENST00000307792 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
SEMA3E-201ENST00000307792 TRIM52Q96A61 297 aa14.71□□□□□ -0.06
SEMA3E-201ENST00000307792 ZNF777Q9ULD5 760 aaPredicted RBP14.69□□□□□ -0.06
SEMA3E-201ENST00000307792 NACADO15069 1562 aa14.69□□□□□ -0.06
SEMA3E-201ENST00000307792 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
SEMA3E-201ENST00000307792 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
SEMA3E-201ENST00000307792 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
SEMA3E-201ENST00000307792 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
SEMA3E-201ENST00000307792 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
SEMA3E-201ENST00000307792 PPARGC1BQ86YN6 1023 aaKnown RBP14.56□□□□□ -0.08
SEMA3E-201ENST00000307792 C14orf37Q86TY3 774 aa14.53□□□□□ -0.08
SEMA3E-201ENST00000307792 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
SEMA3E-201ENST00000307792 KCNH8Q96L42 1107 aa14.47□□□□□ -0.09
SEMA3E-201ENST00000307792 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
SEMA3E-201ENST00000307792 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
SEMA3E-201ENST00000307792 A0A0G2JS52 829 aa14.42□□□□□ -0.1
SEMA3E-201ENST00000307792 NEFMP07197 916 aa14.42□□□□□ -0.1
SEMA3E-201ENST00000307792 ZNF326Q5BKZ1 582 aaKnown RBP14.41□□□□□ -0.1
SEMA3E-201ENST00000307792 PPP1R15AO75807 674 aaPredicted RBP14.41□□□□□ -0.1
SEMA3E-201ENST00000307792 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
SEMA3E-201ENST00000307792 ZCCHC6Q5VYS8 1495 aaKnown RBP14.34□□□□□ -0.11
SEMA3E-201ENST00000307792 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.12
SEMA3E-201ENST00000307792 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
SEMA3E-201ENST00000307792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEMA3E-201ENST00000307792 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
SEMA3E-201ENST00000307792 TSPY4P0CV99 314 aa14.29□□□□□ -0.12
SEMA3E-201ENST00000307792 TSPY10P0CW01 314 aa14.29□□□□□ -0.12
SEMA3E-201ENST00000307792 MYT1Q01538 1121 aa14.25□□□□□ -0.13
SEMA3E-201ENST00000307792 NEFLP07196 543 aa14.24□□□□□ -0.13
SEMA3E-201ENST00000307792 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
SEMA3E-201ENST00000307792 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
SEMA3E-201ENST00000307792 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
SEMA3E-201ENST00000307792 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
SEMA3E-201ENST00000307792 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
SEMA3E-201ENST00000307792 MLECQ14165 292 aa14.19□□□□□ -0.14
SEMA3E-201ENST00000307792 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
SEMA3E-201ENST00000307792 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SEMA3E-201ENST00000307792 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
SEMA3E-201ENST00000307792 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
SEMA3E-201ENST00000307792 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
SEMA3E-201ENST00000307792 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
SEMA3E-201ENST00000307792 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
SEMA3E-201ENST00000307792 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.15
SEMA3E-201ENST00000307792 LOC105371045A0A1W2PR82 267 aa14.08□□□□□ -0.15
SEMA3E-201ENST00000307792 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
SEMA3E-201ENST00000307792 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
SEMA3E-201ENST00000307792 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
SEMA3E-201ENST00000307792 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
SEMA3E-201ENST00000307792 CENPBP07199 599 aaPredicted RBP14□□□□□ -0.17
SEMA3E-201ENST00000307792 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
SEMA3E-201ENST00000307792 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
SEMA3E-201ENST00000307792 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
SEMA3E-201ENST00000307792 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
SEMA3E-201ENST00000307792 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
SEMA3E-201ENST00000307792 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
SEMA3E-201ENST00000307792 NPHP1O15259 732 aa13.97□□□□□ -0.17
SEMA3E-201ENST00000307792 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
SEMA3E-201ENST00000307792 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.18
SEMA3E-201ENST00000307792 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
SEMA3E-201ENST00000307792 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
SEMA3E-201ENST00000307792 KANK1Q14678 1352 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms