Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 AC004687.1-201ENST00000579003 1625 ntBASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD3-BMI1R4GMX3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD3-BMI1R4GMX3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD3-BMI1R4GMX3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 UNC93B8-201ENST00000511903 705 ntBASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD3-BMI1R4GMX3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 AC116562.4-201ENST00000641316 2276 ntBASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD3-BMI1R4GMX3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MIR6724-1-201ENST00000616420 92 ntBASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MIR6724-2-201ENST00000616483 92 ntBASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MIR6724-4-201ENST00000617390 92 ntBASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 MIR6724-3-201ENST00000622482 92 ntBASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
COMMD3-BMI1R4GMX3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms