Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB9Q9Y5E1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB9Q9Y5E1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 AC105036.2-201ENST00000569468 176 ntBASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB9Q9Y5E1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 KRT18P29-201ENST00000397031 1267 ntBASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 PKD1P6-201ENST00000343738 4769 ntBASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB9Q9Y5E1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB9Q9Y5E1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 AC073210.2-201ENST00000430369 194 ntBASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHB9Q9Y5E1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB9Q9Y5E1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB9Q9Y5E1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB9Q9Y5E1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms