Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 EP400NL-214ENST00000641289 2402 ntBASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 KRT18P6-201ENST00000555540 1265 ntBASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 AC092118.2-201ENST00000613495 667 ntBASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00588Q9Y4M8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 AC007322.3-201ENST00000426526 701 ntBASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00588Q9Y4M8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00588Q9Y4M8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 FBXW4P1-201ENST00000426721 2239 ntBASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms