Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPG7Q9UQ90 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 AL596275.1-201ENST00000423464 877 ntBASIC27.29■■□□□ 1.96
SPG7Q9UQ90 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPG7Q9UQ90 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 AC092368.3-202ENST00000574180 1591 ntBASIC27.28■■□□□ 1.96
SPG7Q9UQ90 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 AL359736.2-201ENST00000621992 437 ntBASIC27.28■■□□□ 1.96
SPG7Q9UQ90 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPG7Q9UQ90 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 CYP21A1P-202ENST00000354927 1481 ntBASIC27.27■■□□□ 1.96
SPG7Q9UQ90 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 UBE2SP1-201ENST00000450587 669 ntBASIC27.27■■□□□ 1.96
SPG7Q9UQ90 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 USP36-216ENST00000589424 970 ntTSL 5 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.27■■□□□ 1.96
SPG7Q9UQ90 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
SPG7Q9UQ90 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SPG7Q9UQ90 MFF-205ENST00000354503 1085 ntTSL 2 BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 HES2-205ENST00000487437 968 ntTSL 3 BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 C9orf163-202ENST00000624034 2573 ntBASIC27.26■■□□□ 1.95
SPG7Q9UQ90 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SPG7Q9UQ90 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 RHOD-202ENST00000532559 538 ntTSL 3 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.25■■□□□ 1.95
SPG7Q9UQ90 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SPG7Q9UQ90 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 KRT17P3-201ENST00000420566 1262 ntBASIC27.23■■□□□ 1.95
SPG7Q9UQ90 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 AC008550.1-201ENST00000511500 884 ntBASIC27.23■■□□□ 1.95
SPG7Q9UQ90 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms