Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 AC092053.2-201ENST00000640557 1818 ntBASIC20.27■□□□□ 0.84
SATB2Q9UPW6 AC137767.1-201ENST00000602918 1920 ntBASIC20.27■□□□□ 0.84
SATB2Q9UPW6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 AL512625.2-201ENST00000417533 625 ntBASIC20.27■□□□□ 0.84
SATB2Q9UPW6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 RPS2P52-201ENST00000469610 820 ntBASIC20.27■□□□□ 0.84
SATB2Q9UPW6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SATB2Q9UPW6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SATB2Q9UPW6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SATB2Q9UPW6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.27■□□□□ 0.83
SATB2Q9UPW6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SATB2Q9UPW6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.26■□□□□ 0.83
SATB2Q9UPW6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 AC083880.1-201ENST00000608266 535 ntBASIC20.25■□□□□ 0.83
SATB2Q9UPW6 AC120498.10-201ENST00000621827 505 ntBASIC20.25■□□□□ 0.83
SATB2Q9UPW6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.25■□□□□ 0.83
SATB2Q9UPW6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.24■□□□□ 0.83
SATB2Q9UPW6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC098590.1-201ENST00000468126 897 ntBASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC097658.1-201ENST00000475555 843 ntBASIC20.23■□□□□ 0.83
SATB2Q9UPW6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 AC008175.2-201ENST00000612840 297 ntBASIC20.23■□□□□ 0.83
SATB2Q9UPW6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SATB2Q9UPW6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms