Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 AC006128.1-201ENST00000624704 1661 ntBASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 MIR935-201ENST00000401179 91 ntBASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC3Q9UN70 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 AC091799.1-201ENST00000422823 811 ntBASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 AC006015.1-201ENST00000429970 570 ntBASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC3Q9UN70 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.95■■□□□ 1.11
PCDHGC3Q9UN70 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHGC3Q9UN70 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC3Q9UN70 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 AC010536.3-201ENST00000620306 533 ntBASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC3Q9UN70 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 AC116050.2-201ENST00000612102 1779 ntBASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC3Q9UN70 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms