Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 AC098934.4-201ENST00000564127 592 ntBASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE7Q9UBL6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 BX276092.2-201ENST00000417668 665 ntBASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE7Q9UBL6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 AC092118.2-201ENST00000613495 667 ntBASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE7Q9UBL6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE7Q9UBL6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 AC007322.3-201ENST00000426526 701 ntBASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 CD99P1-205ENST00000527459 561 ntBASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 KRT18P6-201ENST00000555540 1265 ntBASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 AC244015.2-201ENST00000616358 1861 ntBASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE7Q9UBL6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms