Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AC020907.5-201ENST00000624372 1936 ntBASIC20.06■□□□□ 0.8
TUBB1Q9H4B7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBB1Q9H4B7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBB1Q9H4B7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 FP700111.2-201ENST00000619190 1892 ntBASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBB1Q9H4B7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 SUDS3P1-201ENST00000505831 966 ntBASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TUBB1Q9H4B7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBB1Q9H4B7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 AC011484.1-201ENST00000377652 1995 ntBASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB1Q9H4B7 PCDHAC2-203ENST00000615316 3011 ntBASIC20■□□□□ 0.79
TUBB1Q9H4B7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TUBB1Q9H4B7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 AP004607.4-201ENST00000530158 1459 ntBASIC20■□□□□ 0.79
TUBB1Q9H4B7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20■□□□□ 0.79
TUBB1Q9H4B7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20■□□□□ 0.79
TUBB1Q9H4B7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TUBB1Q9H4B7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TUBB1Q9H4B7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB1Q9H4B7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms