Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 EEF1DP3-203ENST00000566025 782 ntBASIC20.89■□□□□ 0.93
CLPBQ9H078 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.89■□□□□ 0.93
CLPBQ9H078 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.89■□□□□ 0.93
CLPBQ9H078 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.89■□□□□ 0.93
CLPBQ9H078 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.89■□□□□ 0.93
CLPBQ9H078 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.89■□□□□ 0.93
CLPBQ9H078 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPBQ9H078 GPX1P1-201ENST00000388829 606 ntBASIC20.88■□□□□ 0.93
CLPBQ9H078 AL355802.2-201ENST00000402069 882 ntBASIC20.88■□□□□ 0.93
CLPBQ9H078 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPBQ9H078 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.88■□□□□ 0.93
CLPBQ9H078 AC053503.5-201ENST00000601508 636 ntBASIC20.88■□□□□ 0.93
CLPBQ9H078 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.88■□□□□ 0.93
CLPBQ9H078 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPBQ9H078 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLPBQ9H078 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.87■□□□□ 0.93
CLPBQ9H078 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
CLPBQ9H078 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.87■□□□□ 0.93
CLPBQ9H078 AC007322.1-201ENST00000426983 750 ntBASIC20.87■□□□□ 0.93
CLPBQ9H078 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPBQ9H078 KRT18P20-201ENST00000548986 1279 ntBASIC20.87■□□□□ 0.93
CLPBQ9H078 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPBQ9H078 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CLPBQ9H078 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPBQ9H078 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPBQ9H078 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.87■□□□□ 0.93
CLPBQ9H078 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLPBQ9H078 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.86■□□□□ 0.93
CLPBQ9H078 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPBQ9H078 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPBQ9H078 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPBQ9H078 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.86■□□□□ 0.93
CLPBQ9H078 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPBQ9H078 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPBQ9H078 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPBQ9H078 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPBQ9H078 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CLPBQ9H078 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPBQ9H078 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPBQ9H078 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.85■□□□□ 0.93
CLPBQ9H078 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPBQ9H078 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPBQ9H078 CNN2P6-201ENST00000439038 900 ntBASIC20.85■□□□□ 0.93
CLPBQ9H078 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.85■□□□□ 0.93
CLPBQ9H078 AC005181.1-201ENST00000604782 1256 ntBASIC20.85■□□□□ 0.93
CLPBQ9H078 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CLPBQ9H078 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPBQ9H078 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPBQ9H078 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPBQ9H078 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.85■□□□□ 0.93
CLPBQ9H078 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPBQ9H078 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLPBQ9H078 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.84■□□□□ 0.93
CLPBQ9H078 AC083906.2-201ENST00000511578 360 ntBASIC20.84■□□□□ 0.93
CLPBQ9H078 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLPBQ9H078 AL121832.2-201ENST00000610979 668 ntBASIC20.84■□□□□ 0.93
CLPBQ9H078 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.84■□□□□ 0.93
CLPBQ9H078 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLPBQ9H078 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPBQ9H078 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.93
CLPBQ9H078 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLPBQ9H078 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPBQ9H078 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.83■□□□□ 0.93
CLPBQ9H078 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.83■□□□□ 0.93
CLPBQ9H078 FEM1AP4-201ENST00000443167 1987 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms