Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 AP004607.4-201ENST00000530158 1459 ntBASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBNA1BP2Q99848 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EBNA1BP2Q99848 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 AC027702.1-201ENST00000563810 1770 ntBASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBNA1BP2Q99848 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBNA1BP2Q99848 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
EBNA1BP2Q99848 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 AL358852.1-201ENST00000623174 1268 ntBASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBNA1BP2Q99848 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBNA1BP2Q99848 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBNA1BP2Q99848 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms