Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21■□□□□ 0.95
LRRC39Q96DD0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21■□□□□ 0.95
LRRC39Q96DD0 AF213884.3-201ENST00000563833 479 ntBASIC21■□□□□ 0.95
LRRC39Q96DD0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21■□□□□ 0.95
LRRC39Q96DD0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 AC027702.1-201ENST00000563810 1770 ntBASIC21■□□□□ 0.95
LRRC39Q96DD0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
LRRC39Q96DD0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LRRC39Q96DD0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 AL354811.1-201ENST00000610286 706 ntBASIC20.99■□□□□ 0.95
LRRC39Q96DD0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 AC020907.5-201ENST00000624372 1936 ntBASIC20.99■□□□□ 0.95
LRRC39Q96DD0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC39Q96DD0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.98■□□□□ 0.95
LRRC39Q96DD0 AL136967.2-201ENST00000623968 743 ntBASIC20.98■□□□□ 0.95
LRRC39Q96DD0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC39Q96DD0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 AC110285.6-201ENST00000617652 491 ntBASIC20.97■□□□□ 0.95
LRRC39Q96DD0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC39Q96DD0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.96■□□□□ 0.95
LRRC39Q96DD0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 AL031432.3-201ENST00000607698 485 ntBASIC20.96■□□□□ 0.95
LRRC39Q96DD0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 AC061975.6-201ENST00000579045 1553 ntBASIC20.96■□□□□ 0.95
LRRC39Q96DD0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC39Q96DD0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.95■□□□□ 0.95
LRRC39Q96DD0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC39Q96DD0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC39Q96DD0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms