Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 MIR638-201ENST00000385237 100 ntBASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXRED1Q96CU9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.02■□□□□ 0.47
FOXRED1Q96CU9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 AC073314.1-201ENST00000568729 2216 ntBASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 MIR4767-201ENST00000582827 78 ntBASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXRED1Q96CU9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 AL355001.2-201ENST00000620617 1191 ntBASIC18■□□□□ 0.47
FOXRED1Q96CU9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18■□□□□ 0.47
FOXRED1Q96CU9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXRED1Q96CU9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 AC009237.3-201ENST00000393279 1427 ntBASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SMUG1P1-201ENST00000590640 811 ntBASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXRED1Q96CU9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms