Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 AC027702.1-201ENST00000563810 1770 ntBASIC19.93■□□□□ 0.78
VPS33AQ96AX1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS33AQ96AX1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 BX842568.3-201ENST00000418104 571 ntBASIC19.92■□□□□ 0.78
VPS33AQ96AX1 MIR4767-201ENST00000582827 78 ntBASIC19.92■□□□□ 0.78
VPS33AQ96AX1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS33AQ96AX1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS33AQ96AX1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS33AQ96AX1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VPS33AQ96AX1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS33AQ96AX1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
VPS33AQ96AX1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms