Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP6V0A1Q93050 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.31■■□□□ 1.32
ATP6V0A1Q93050 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP6V0A1Q93050 FBXW4P1-201ENST00000426721 2239 ntBASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 POU5F1P3-201ENST00000428824 1078 ntBASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP6V0A1Q93050 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 AC010980.2-201ENST00000587099 1412 ntBASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 RARRES2P4-201ENST00000514074 484 ntBASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATP6V0A1Q93050 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 AC091799.1-201ENST00000422823 811 ntBASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATP6V0A1Q93050 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
ATP6V0A1Q93050 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 AC097658.1-201ENST00000475555 843 ntBASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A1Q93050 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A1Q93050 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms