Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNED1Q8TER0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 BX088651.1-201ENST00000540551 451 ntBASIC25.51■■□□□ 1.67
SNED1Q8TER0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SNED1Q8TER0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNED1Q8TER0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SNED1Q8TER0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNED1Q8TER0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 MIR1224-201ENST00000408193 85 ntBASIC25.49■■□□□ 1.67
SNED1Q8TER0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNED1Q8TER0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.49■■□□□ 1.67
SNED1Q8TER0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNED1Q8TER0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNED1Q8TER0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNED1Q8TER0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 AC007322.3-201ENST00000426526 701 ntBASIC25.48■■□□□ 1.67
SNED1Q8TER0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 LINC01023-201ENST00000606054 436 ntBASIC25.48■■□□□ 1.67
SNED1Q8TER0 AC010331.1-201ENST00000611423 582 ntBASIC25.48■■□□□ 1.67
SNED1Q8TER0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNED1Q8TER0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNED1Q8TER0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.48■■□□□ 1.67
SNED1Q8TER0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNED1Q8TER0 AC068473.5-201ENST00000616428 2072 ntBASIC25.47■■□□□ 1.67
SNED1Q8TER0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.47■■□□□ 1.67
SNED1Q8TER0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms