Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 AC022517.1-201ENST00000592429 346 ntBASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNRF1Q8ND25 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 MYCNOS-205ENST00000641950 531 ntBASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNRF1Q8ND25 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 AC245052.3-201ENST00000450182 901 ntBASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNRF1Q8ND25 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 KRT18P11-201ENST00000435214 1283 ntBASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 SLC7A5P1-201ENST00000568957 537 ntBASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 RARRES2P11-201ENST00000635158 484 ntBASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNRF1Q8ND25 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNRF1Q8ND25 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms