Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AC069152.1-201ENST00000438030 544 ntBASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AL162412.1-201ENST00000567129 965 ntBASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 MIR4758-201ENST00000577688 71 ntBASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AC133041.1-202ENST00000642053 222 ntBASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 AL117328.2-201ENST00000624617 1940 ntBASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNEP1R1Q8N9A8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CNEP1R1Q8N9A8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 MIPEPP3-201ENST00000412105 444 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 AL512625.2-201ENST00000417533 625 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 BX276092.2-201ENST00000417668 665 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 CDV3P1-201ENST00000471403 739 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 RARRES2P4-201ENST00000514074 484 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNEP1R1Q8N9A8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 CD99P1-205ENST00000527459 561 ntBASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 AC098934.4-201ENST00000564127 592 ntBASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 AIRN-201ENST00000601203 4374 ntBASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNEP1R1Q8N9A8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 AC091799.1-201ENST00000422823 811 ntBASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNEP1R1Q8N9A8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms