Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF7Q8N684 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPSF7Q8N684 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF7Q8N684 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.28■□□□□ 0.84
CPSF7Q8N684 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPSF7Q8N684 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CPSF7Q8N684 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF7Q8N684 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.28■□□□□ 0.84
CPSF7Q8N684 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.28■□□□□ 0.84
CPSF7Q8N684 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF7Q8N684 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF7Q8N684 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF7Q8N684 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF7Q8N684 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF7Q8N684 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF7Q8N684 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF7Q8N684 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.27■□□□□ 0.84
CPSF7Q8N684 AC010525.1-201ENST00000585559 441 ntBASIC20.27■□□□□ 0.84
CPSF7Q8N684 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
CPSF7Q8N684 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF7Q8N684 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CPSF7Q8N684 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF7Q8N684 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF7Q8N684 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF7Q8N684 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF7Q8N684 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF7Q8N684 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF7Q8N684 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.25■□□□□ 0.83
CPSF7Q8N684 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 AC027702.1-201ENST00000563810 1770 ntBASIC20.25■□□□□ 0.83
CPSF7Q8N684 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.25■□□□□ 0.83
CPSF7Q8N684 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF7Q8N684 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 AP006587.3-201ENST00000525742 1516 ntBASIC20.24■□□□□ 0.83
CPSF7Q8N684 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 IGHV3-19-201ENST00000521488 291 ntBASIC20.24■□□□□ 0.83
CPSF7Q8N684 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPSF7Q8N684 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF7Q8N684 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.23■□□□□ 0.83
CPSF7Q8N684 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF7Q8N684 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms