Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 MIR6821-201ENST00000617625 74 ntBASIC17.16■□□□□ 0.34
COMMD1Q8N668 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD1Q8N668 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD1Q8N668 GABARAPL3-202ENST00000624044 1851 ntBASIC17.16■□□□□ 0.34
COMMD1Q8N668 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 AC097381.1-201ENST00000429019 1296 ntBASIC17.15■□□□□ 0.34
COMMD1Q8N668 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD1Q8N668 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD1Q8N668 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COMMD1Q8N668 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 OXCT2P1-201ENST00000447263 1535 ntBASIC17.14■□□□□ 0.33
COMMD1Q8N668 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD1Q8N668 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD1Q8N668 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 AC010141.3-201ENST00000456659 717 ntBASIC17.13■□□□□ 0.33
COMMD1Q8N668 AC012414.1-201ENST00000556676 535 ntBASIC17.13■□□□□ 0.33
COMMD1Q8N668 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD1Q8N668 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COMMD1Q8N668 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COMMD1Q8N668 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD1Q8N668 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 AC026271.2-201ENST00000428091 497 ntBASIC17.12■□□□□ 0.33
COMMD1Q8N668 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD1Q8N668 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD1Q8N668 AL031602.1-201ENST00000633169 911 ntBASIC17.12■□□□□ 0.33
COMMD1Q8N668 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD1Q8N668 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms